Group DNA

Format Conversion

-Combine FASTA
-EMBL to FASTA
-EMBL Feature Extractor
-EMBL Trans Extractor
-Filter DNA
-Filter Protein
-GenBank to FASTA
-GenBank Feature Extractor
-GenBank Trans Extractor
-One to Three
-Range Extractor DNA
-Range Extractor Protein
-Reverse Complement
-Three to One

Sequence Analysis

Sequence Figures

-Color Align Conservation
-Color Align Properties
-Group DNA
-Group Protein
-Primer Map
-Restriction Map
-Translation Map

Random Sequences

-Mutate DNA
-Mutate Protein
-Random Coding DNA
-Random DNA Sequence
-Random Protein Sequence
-Sample DNA
-Sample Protein
-Shuffle DNA
-Shuffle Protein

Miscellaneous

-IUPAC codes
-Genetic codes
-Browser compatibility
-Mirror this site
-Use this site off-line
-About this site
-Acknowledgments
-Reference

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Sequence Manipulation Suite:

Group DNA

Group DNA adjusts the spacing of DNA sequences and adds numbering. You can specify the group size (the number of bases per group), as well as the number of bases per line. The output of this program can serve as a convenient reference, since the numbering and spacing allows you to quickly locate specific bases.

Paste the raw sequence or one or more FASTA sequences into the text area below. Input limit is 100000 characters.

>CDS /gene="fem-2" (exons highlighted in uppercase by GenBank Feature Extractor)
gaacgcgaatgcctctctctctttcgatgggtatgccaattgtccacattcactcgtgttgcctcctctttgccaacacgcaagacaccagaaacgcgtcaaccaaagagaaaaagacgccgacaacgggcagcactcgcgagagacaaaggttatcgcgttgtgttattatacattcgcatccgggtcaactttagtccgttgaacatgcttcttgaaaacctagttctcttaaaataacgttttagaagttttggtcttcagATGTCTGATTCGCTAAATCATCCATCGAGTTCTACGGTGCATGCAGATGATGGATTCGAGCCACCAACATCTCCGGAAGACAACAACAAAAAACCGTCTTTAGAACAAATTAAACAGGAAAGAGAAGCGTTGTTTACGgttagttacctattagctgcaagttttgaaaaagcggaatctgtaaaaagcggaatctgtaaaaaaaacatctaaggaataattctgaaaagaaaaagtttctaaatgttaatcggaatccaatttttatgaaattatttaaaaaaaaactaaaattagtttctaaaaaatttttctaaagtaattggaccatgtgaaggtacacccacttgttccaatatgccatatctaactgtaaaataatttgattctcatgagaatatttttcagGATCTATTCGCAGATCGTCGACGAAGCGCTCGTTCTGTGATTGAAGAAGCTTTCCAAAACGAACTCATGAGTGCTGAACCAGTCCAGCCAAACGTGCCGAATCCACATTgtgagttggaaatttttatttgataaccaagagaaaaaaagttctacctttttttcaaaaacctttccaaaaatgattccatctgatataggattaagaaaaatattttccgaaatctctgcttttcagCGATTCCCATTCGTTTCCGTCATCAACCAGTTGCTGGACCTGCTCATGATGTTTTCGGAGACGCGGTGCATTCAATTTTTCAAAAAATAATGTCCAGgtatacactatttttgcatatttttcttgccaaatttggtcaaaaaccgtagtacaacccaaaaagtttcttcatttcagAGGAGTGAACGCGGATTATAGTCATTGGATGTCATATTGGATCGCGTTGGGAATCGACAAAAAAACACAAATGAACTATCATATGAAACCGTTTTGCAAAGATACTTATGCAACTGAAGGCTCCTTAGgtaggttagtcttttctaggcacagaagagtgagaaaattctaaatttctgagcagtctgctttttgttttccttgagtttttacttaaagctcttaaaagaaatctaggcgtgaagttcgagccttgtaccataccacaacagcattccaaatgttacagAAGCGAAACAAACATTTACTGATAAAATCAGGTCAGCTGTTGAGGAAATTATCTGGAAGTCCGCTGAATATTGTGATATTCTTAGCGAGAAGTGGACAGGAATTCATGTGTCGGCCGACCAACTGAAAGGTCAAAGAAATAAGCAAGAAGATCGTTTTGTGGCTTATCCAAATGGACAATACATGAATCGTGGACAGgttagtgcgaatcggggactcaagatttactgaaatagtgaagagaaaacaaaagaaaactatattttcaaaaaaaatgagaactctaataaacagaatgaaaaacattcaaagctacagtagtatttccagctggagtttccagagccaaaaaaatgcgagtattactgtagttttgaaattggtttctcactttacgtacgattttttgatttttttttcagactcttcatatgaaaaaaaatcatgttttctcctttacaagatttttttgatctcaaaacatttccagAGTGACATTTCACTTCTTGCGGTGTTCGATGGGCATGGCGGACACGAGTGCTCTCAATATGCAGCTGCTCATTTCTGGGAAGCATGGTCCGATGCTCAACATCATCATTCACAAGATATGAAACTTGACGAACTCCTAGAAAAGGCTCTAGAAACATTGGACGAAAGAATGACAGTCAGAAGTGTTCGAGAATCTTGGAAAGGTGGAACCACTGCTGTCTGCTGTGCTGTTGATTTGAACACTAATCAAATCGCATTTGCCTGGCTTGGAGATTCACCAGGgtaatcaatttttttttagtttttggaactttacgtcccgaaaaattattcctttatcacctaattcctacagtaacccaagctccgaattaaataaagttaaagcgtggtatacacataaaaataagaaaaaattgttcatgaaatccatttttccagTTACATCATGTCAAACTTGGAGTTCCGCAAATTCACTACTGAACACTCCCCGTCTGACCCGGAGGAATGTCGACGAGTCGAAGAAGTCGGTGGCCAGATTTTTGTGATCGGTGGTGAGCTCCGTGTGAATGGAGTACTCAACCTGACGCGAGCACTAGGAGACGTACCTGGAAGACCAATGATATCCAACAAACCTGATACCTTACTGAAGACGATCGAACCTGCGGATTATCTTGTTTTGTTGGCCTGTGACGGGATTTCTGACGTCTTCAACACTAGTGATTTGTACAATTTGGTTCAGGCTTTTGTCAATGAATATGACGTAGAAGgtatcaaactgatcgtttttcacatcacaaaattcttgaattttccagATTATCACGAACTTGCACGCTACATTTGCAATCAAGCAGTTTCAGCTGGAAGTGCTGACAATGTGACAGTAGTTATAGGTTTCCTCCGTCCACCAGAAGACGTTTGGCGTGTAATGAAAACAGACTCGGATGATGAAGAGAGCGAGCTCGAGGAAGAAGATGACAATGAATAGtttattgcaagttttccaaaacttttccaatttccctgggtattgattagcatccatatcttacggcgattatatcaattgtaacattatttctgtttctccccccacctctcaaattttcaaatgaccctttttcttttcgtctacctgtatcgttttccattcatctccccccctccactgtggtatatcattttgtcattagaaagtattattttgattttcattggcagtagaagacaacaggatacagaagaggttttcacag

Please check the browser compatibility page before using this program.

Use a group size of and display bases per line.
the reverse strand.
Show numbering the sequence.

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new window | home | citation 2.4.1-Fri Oct 27 19:08:38 2006